from a scientist trying to use computers to do science
Friday, July 19, 2013
summarize_taxa_through_plots give json error
When running Qiime's summarize_taxa_through_plots.py, I get an error No JSON object could be decoded. I fixed this by making sure that the input OTU table was in biom format and had "taxonomy" in place of the "consensus lineage" header output by make_otu_table.